Friday, May 7, 2010

Google Summer of Code

http://www.open-bio.org/wiki/Google_Summer_of_Code

* (BioPerl) Major BioPerl reorganization
* (BioPerl) Lightweight Sequence objects and Lazy Parsing
* (BioPerl) Alignment Subsystem Refactoring
* (BioPerl) Perl Run Wrappers for External Programs in a Flash
* (BioPerl) BioPerl 2.0: Modern::Perl, Perl6, and BioPerl
* (Biopython) Biopython and PyCogent interoperability
* (Biopython) Galaxy phylogenetics pipeline development
* (Biopython) Accessing R phylogenetic tools from Python
* (Biopython) PDB-Tidy: Command-line tools for manipulating PDB files
* (BioJava) All-Java Multiple Sequence Alignment
* (BioRuby) Ruby 1.9.2 support of BioRuby
* (BioRuby) Implementation of algorithm to infer gene duplications in BioRuby
* (Biolib) Mapping JAVA libraries to Perl/Ruby/Python using Biolib+SWIG+JNI
* (BioDAS) Redesign of the DAS Registry
* (BioDAS) DAS Server for large files on local filesystems

BioDAS
http://www.biodas.org/wiki/Main_Page

http://www.biodas.org/wiki/DASWorkshop2010

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